Update to reveal.js 4.1.2 (#136)

- New tools/ script to manually keep step for updates
- Plugins are all updated
- Template update following latest Pandoc version
- updated README for documentation
- Help page updated 
- See other change in NEWS file
diff --git a/inst/reveal.js-4.1.2/js/controllers/notes.js b/inst/reveal.js-4.1.2/js/controllers/notes.js
new file mode 100644
index 0000000..8ec1d42
--- /dev/null
+++ b/inst/reveal.js-4.1.2/js/controllers/notes.js
@@ -0,0 +1,114 @@
+/**
+ * Handles the showing and 
+ */
+export default class Notes {
+
+	constructor( Reveal ) {
+
+		this.Reveal = Reveal;
+
+	}
+
+	render() {
+
+		this.element = document.createElement( 'div' );
+		this.element.className = 'speaker-notes';
+		this.element.setAttribute( 'data-prevent-swipe', '' );
+		this.element.setAttribute( 'tabindex', '0' );
+		this.Reveal.getRevealElement().appendChild( this.element );
+
+	}
+
+	/**
+	 * Called when the reveal.js config is updated.
+	 */
+	configure( config, oldConfig ) {
+
+		if( config.showNotes ) {
+			this.element.setAttribute( 'data-layout', typeof config.showNotes === 'string' ? config.showNotes : 'inline' );
+		}
+
+	}
+
+	/**
+	 * Pick up notes from the current slide and display them
+	 * to the viewer.
+	 *
+	 * @see {@link config.showNotes}
+	 */
+	update() {
+
+		if( this.Reveal.getConfig().showNotes && this.element && this.Reveal.getCurrentSlide() && !this.Reveal.print.isPrintingPDF() ) {
+
+			this.element.innerHTML = this.getSlideNotes() || '<span class="notes-placeholder">No notes on this slide.</span>';
+
+		}
+
+	}
+
+	/**
+	 * Updates the visibility of the speaker notes sidebar that
+	 * is used to share annotated slides. The notes sidebar is
+	 * only visible if showNotes is true and there are notes on
+	 * one or more slides in the deck.
+	 */
+	updateVisibility() {
+
+		if( this.Reveal.getConfig().showNotes && this.hasNotes() && !this.Reveal.print.isPrintingPDF() ) {
+			this.Reveal.getRevealElement().classList.add( 'show-notes' );
+		}
+		else {
+			this.Reveal.getRevealElement().classList.remove( 'show-notes' );
+		}
+
+	}
+
+	/**
+	 * Checks if there are speaker notes for ANY slide in the
+	 * presentation.
+	 */
+	hasNotes() {
+
+		return this.Reveal.getSlidesElement().querySelectorAll( '[data-notes], aside.notes' ).length > 0;
+
+	}
+
+	/**
+	 * Checks if this presentation is running inside of the
+	 * speaker notes window.
+	 *
+	 * @return {boolean}
+	 */
+	isSpeakerNotesWindow() {
+
+		return !!window.location.search.match( /receiver/gi );
+
+	}
+
+	/**
+	 * Retrieves the speaker notes from a slide. Notes can be
+	 * defined in two ways:
+	 * 1. As a data-notes attribute on the slide <section>
+	 * 2. As an <aside class="notes"> inside of the slide
+	 *
+	 * @param {HTMLElement} [slide=currentSlide]
+	 * @return {(string|null)}
+	 */
+	getSlideNotes( slide = this.Reveal.getCurrentSlide() ) {
+
+		// Notes can be specified via the data-notes attribute...
+		if( slide.hasAttribute( 'data-notes' ) ) {
+			return slide.getAttribute( 'data-notes' );
+		}
+
+		// ... or using an <aside class="notes"> element
+		let notesElement = slide.querySelector( 'aside.notes' );
+		if( notesElement ) {
+			return notesElement.innerHTML;
+		}
+
+		return null;
+
+	}
+
+}
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