Bugfixes for negative segments, focus() and some logging issues
diff --git a/src/main/java/de/ids_mannheim/korap/KorapQuery.java b/src/main/java/de/ids_mannheim/korap/KorapQuery.java
index 6df320e..11616ea 100644
--- a/src/main/java/de/ids_mannheim/korap/KorapQuery.java
+++ b/src/main/java/de/ids_mannheim/korap/KorapQuery.java
@@ -61,6 +61,7 @@
 	STARTSWITH   = SpanWithinQuery.STARTSWITH,
 	MATCH        = SpanWithinQuery.MATCH;
 
+    private static final int MAX_CLASS_NUM = 127;
 
     /**
      * Constructs a new base object for query generation.
@@ -78,6 +79,7 @@
 	public int min, max;
 
 	public Boundary (JsonNode json, int defaultMin, int defaultMax) throws QueryException {
+
 	    if (!json.has("@type") ||
 		!json.get("@type").asText().equals("korap:boundary")) {
 		throw new QueryException("Boundary definition is not valid");
@@ -85,6 +87,9 @@
 
 	    min = json.get("min").asInt(defaultMin);
 	    max = json.get("max").asInt(defaultMax);
+
+	    if (DEBUG)
+		log.trace("Found korap:boundary with {}:{}");
 	};
     };
 
@@ -110,6 +115,8 @@
     // TODO: Rename this span context!
     public SpanQueryWrapperInterface fromJSON (JsonNode json) throws QueryException {
 
+	int number = 0;
+
 	if (!json.has("@type")) {
 	    throw new QueryException("JSON-LD group has no @type attribute");
 	};
@@ -126,9 +133,15 @@
 
 	    String operation = json.get("operation").asText();
 
+	    if (DEBUG)
+		log.trace("Found {} group", operation);
+
 	    // Get all operands
 	    JsonNode operands = json.get("operands");
 
+	    if (DEBUG)
+		log.trace("Operands are {}", operands);
+
 	    if (!json.has("operands") || !operands.isArray())
 		throw new QueryException("Operation needs operand list");
 
@@ -143,15 +156,19 @@
 		return ssaq;
 
 	    case "operation:position":
-		if (!json.has("frame"))
-		    throw new QueryException("Operation needs frame specification");
 
 		if (operands.size() != 2)
 		    throw new QueryException("Operation needs exactly two operands");
 
 		// TODO: Check for operands
 
-		String frame = json.has("frame") ? json.get("frame").asText() : "contains";
+		String frame = json.has("frame") ?
+		    json.get("frame").asText() :
+		    "frame:contains";
+
+		if (DEBUG)
+		    log.trace("Position frame is '{}'", frame);
+
 		byte flag = WITHIN;
 		switch (frame) {
 		case "frame:contains":
@@ -183,7 +200,9 @@
 		// Check for exclusion modificator
 		Boolean exclude;
 		if (json.has("exclude") && json.get("exclude").asBoolean())
-		    throw new QueryException("Exclusion is currently not supported in position operations");
+		    throw new QueryException(
+		        "Exclusion is currently not supported in position operations"
+		    );
 
 		return new SpanWithinQueryWrapper(
 		    this.fromJSON(operands.get(0)),
@@ -193,7 +212,6 @@
 
 	    // TODO: This is DEPRECATED and should be communicated that way
 	    case "operation:submatch":
-		int number = 0;
 
 		if (operands.size() != 1)
 		    throw new QueryException("Operation needs exactly two operands");
@@ -213,10 +231,6 @@
                 );
 
 	    case "operation:sequence":
-		if (DEBUG)  {
-		    log.trace("Found new sequence");
-		    System.err.println("----");
-		};
 
 		if (operands.size() < 2)
 		    throw new QueryException(
@@ -260,7 +274,9 @@
 			    unit = constraint.get("key").asText();
 
 			if (unit.equals("t"))
-			    throw new QueryException("Text based distances are not supported yet");
+			    throw new QueryException(
+			        "Text based distances are not supported yet"
+                            );
 
 			int min, max;
 			if (constraint.has("boundary")) {
@@ -285,27 +301,47 @@
 		return sseqqw;
 
 	    case "operation:class":
+
 		if (json.has("class")) {
 		    if (operands.size() != 1)
 			throw new QueryException(
 			    "Class group expects exactly one operand in list"
 			);
-		    return new SpanClassQueryWrapper(this.fromJSON(operands.get(0)), json.get("class").asInt(0));
+
+		    if (DEBUG)
+			log.trace("Found Class definition for {}", json.get("class").asInt(0));
+
+		    number = json.get("class").asInt(0);
+
+		    if (number > MAX_CLASS_NUM)
+			throw new QueryException("Class numbers limited to " + MAX_CLASS_NUM);
+		    return new SpanClassQueryWrapper(
+		      this.fromJSON(operands.get(0)), number
+                    );
 		};
 
 		throw new QueryException("Class group expects class attribute");
 
 	    case "operation:repetition":
 
-		int min, max;
+		int min = 0;
+		int max = 100;
 		if (json.has("boundary")) {
 		    Boundary b = new Boundary(json.get("boundary"), 0, 100);
 		    min = b.min;
 		    max = b.max;
 		}
 		else {
-		    min = json.get("min").asInt(0);
-		    max = json.get("max").asInt(100);
+		    if (json.has("min"))
+			min = json.get("min").asInt(0);
+		    if (json.has("max"))
+			max = json.get("max").asInt(100);
+
+		    if (DEBUG)
+			log.trace(
+			    "Boundary is set by deprecated {}-{}",
+			    min,
+			    max);
 		};
 
 		// Sanitize max
@@ -322,11 +358,7 @@
 		
 		// Check relation between min and max
 		if (min > max)
-		    throw new QueryException("The maximum repetition value has to " +
-					     "be greater or equal to the minimum repetition value");
-
-		if (DEBUG)
-		    log.trace("Found new repetition %d-%d", min, max);
+		    max = max;
 
 		return new SpanRepetitionQueryWrapper(
 		    this.fromJSON(operands.get(0)), min, max
@@ -336,15 +368,17 @@
 	    throw new QueryException("Unknown group operation");
 
 	case "korap:reference":
-	    if (json.has("operation") && !json.get("operation").asText().equals("operation:focus"))
-		throw new QueryException("Reference operation " + json.get("operation").asText() + " not supported yet");
-
-	    int number = 0;
+	    if (json.has("operation") &&
+		!json.get("operation").asText().equals("operation:focus"))
+		throw new QueryException("Reference operation " +
+					 json.get("operation").asText() +
+					 " not supported yet");
 
 	    operands = json.get("operands");
 
-	    if (operands.size() == 0)
+	    if (operands.size() == 0) {
 		throw new QueryException("Focus with peripheral references is not supported yet");
+	    };
 
 	    if (operands.size() != 1)
 		throw new QueryException("Operation needs exactly two operands");
@@ -355,11 +389,18 @@
 		    throw new QueryException("Class reference operators not supported yet");
 
 		number = json.get("classRef").get(0).asInt();
+
+		if (number > MAX_CLASS_NUM)
+		    throw new QueryException("Class numbers limited to " + MAX_CLASS_NUM);
+
 	    }
 	    else if (json.has("spanRef")) {
 		throw new QueryException("Span references not supported yet");
 	    };
 
+	    if (DEBUG)
+		log.trace("Wrap class reference {}", number);
+
 	    return new SpanMatchModifyQueryWrapper(
 	        this.fromJSON(operands.get(0)), number
 	    );
@@ -383,6 +424,10 @@
 
     private SpanQueryWrapperInterface _segFromJSON (JsonNode json) throws QueryException {
 	String type = json.get("@type").asText();
+
+	if (DEBUG)
+	    log.trace("Wrap new token definition by {}", type);
+
 	switch (type) {
 
 	case "korap:term":
@@ -392,7 +437,12 @@
 
 	    switch (match) {
 	    case "match:ne":
-		return this.seg().without((SpanSegmentQueryWrapper) this._termFromJSON(json));
+		if (DEBUG)
+		    log.trace("Term is negated");
+		SpanSegmentQueryWrapper ssqw =
+		    (SpanSegmentQueryWrapper) this._termFromJSON(json);
+		ssqw.makeNegative();
+		return this.seg().without(ssqw);
 	    case "match:eq":
 		return this._termFromJSON(json);
 	    };
@@ -488,7 +538,6 @@
 	    if (value.length() == 0 && (layer.equals("l") || layer.equals("p")))
 		value.append(defaultFoundry);
 
-
 	    value.append(layer).append(':');
 	};
 
diff --git a/src/main/java/de/ids_mannheim/korap/KorapSearch.java b/src/main/java/de/ids_mannheim/korap/KorapSearch.java
index c86c0d4..c882ae4 100644
--- a/src/main/java/de/ids_mannheim/korap/KorapSearch.java
+++ b/src/main/java/de/ids_mannheim/korap/KorapSearch.java
@@ -59,6 +59,9 @@
 		    this.query = queryIface.toQuery();
 		    if (queryIface.isOptional())
 			this.addWarning("Optionality of query is ignored");
+		    if (queryIface.isNegative())
+			this.addWarning("Exclusivity of query is ignored");
+
 		}
 		catch (QueryException q) {
 		    this.error = q.getMessage();
diff --git a/src/main/java/de/ids_mannheim/korap/query/spans/AttributeSpans.java b/src/main/java/de/ids_mannheim/korap/query/spans/AttributeSpans.java
index b64d253..66b16f3 100644
--- a/src/main/java/de/ids_mannheim/korap/query/spans/AttributeSpans.java
+++ b/src/main/java/de/ids_mannheim/korap/query/spans/AttributeSpans.java
@@ -37,6 +37,9 @@
 	private boolean isFinish;
 	
 	protected Logger logger = LoggerFactory.getLogger(AttributeSpans.class);
+
+        // This advices the java compiler to ignore all loggings
+        public static final boolean DEBUG = false;
 	
 	public AttributeSpans(SpanAttributeQuery simpleSpanQuery,
 			AtomicReaderContext context, Bits acceptDocs,
@@ -73,7 +76,8 @@
 				return true;
 			}
 			else{
-				logger.info("Setting candidate list");
+			        if (DEBUG)
+				    logger.info("Setting candidate list");
 				setCandidateList();
 //				for (CandidateAttributeSpan cs: candidateList){
 //					logger.info("cs ref "+cs.getElementRef());
@@ -95,7 +99,8 @@
 				firstSpans.start() == currentPosition){
 			
 			short elementRef = retrieveElementRef(firstSpans); 
-			logger.info("ElementRef: "+elementRef);
+			if (DEBUG)
+                            logger.info("ElementRef: "+elementRef);
 			candidateList.add(new CandidateAttributeSpan(firstSpans,elementRef));
 			hasMoreSpans = firstSpans.next();
 		}
@@ -112,7 +117,8 @@
 		ByteBuffer wrapper = ByteBuffer.wrap(payload.get(0));
 		short num = wrapper.getShort();
 		long e = System.nanoTime();
-		logger.info("Bytebuffer runtime "+ (e-s));
+		if (DEBUG)
+                    logger.info("Bytebuffer runtime "+ (e-s));
 		return num;				
 	}
 	
diff --git a/src/main/java/de/ids_mannheim/korap/query/spans/ClassSpans.java b/src/main/java/de/ids_mannheim/korap/query/spans/ClassSpans.java
index 6de3fb7..d8cd79b 100644
--- a/src/main/java/de/ids_mannheim/korap/query/spans/ClassSpans.java
+++ b/src/main/java/de/ids_mannheim/korap/query/spans/ClassSpans.java
@@ -19,6 +19,10 @@
 
 import java.nio.ByteBuffer;
 
+/**
+ * @author diewald
+ */
+
 public class ClassSpans extends Spans {
     private List<byte[]> highlightedPayload;
     private Collection<byte[]> payload;
diff --git a/src/main/java/de/ids_mannheim/korap/query/spans/DistanceExclusionSpan.java b/src/main/java/de/ids_mannheim/korap/query/spans/DistanceExclusionSpan.java
index cb83e5c..40ff4ca 100644
--- a/src/main/java/de/ids_mannheim/korap/query/spans/DistanceExclusionSpan.java
+++ b/src/main/java/de/ids_mannheim/korap/query/spans/DistanceExclusionSpan.java
@@ -21,6 +21,9 @@
 	private boolean isOrdered;
 	private boolean hasMoreSecondSpans;
 
+        // This advices the java compiler to ignore all loggings
+        public static final boolean DEBUG = false;
+
 	public DistanceExclusionSpan(SpanDistanceQuery query,
 			AtomicReaderContext context, Bits acceptDocs,
 			Map<Term, TermContext> termContexts, boolean isOrdered) 
@@ -106,8 +109,11 @@
   		setMatchFirstSpan(new CandidateSpan(firstSpans));
   		//setMatchSecondSpan(new CandidateSpan(secondSpans));
   		
-  		log.trace("doc# {}, start {}, end {}",matchDocNumber,matchStartPosition,
-				matchEndPosition);		
+		if (DEBUG)
+		    log.trace("doc# {}, start {}, end {}",
+			      matchDocNumber,
+			      matchStartPosition,
+			      matchEndPosition);		
 	}
 
 	@Override
diff --git a/src/main/java/de/ids_mannheim/korap/query/spans/ElementAttributeSpans.java b/src/main/java/de/ids_mannheim/korap/query/spans/ElementAttributeSpans.java
index d963772..9a1c13b 100644
--- a/src/main/java/de/ids_mannheim/korap/query/spans/ElementAttributeSpans.java
+++ b/src/main/java/de/ids_mannheim/korap/query/spans/ElementAttributeSpans.java
@@ -32,7 +32,10 @@
 	private List<AttributeSpans> notAttributeList;
 	
 	protected Logger logger = LoggerFactory.getLogger(ElementAttributeSpans.class);
-	
+
+        // This advices the java compiler to ignore all loggings
+        public static final boolean DEBUG = false;	
+
 	public ElementAttributeSpans(SpanElementAttributeQuery simpleSpanQuery,
 			AtomicReaderContext context, Bits acceptDocs,
 			Map<Term, TermContext> termContexts) throws IOException {
@@ -73,7 +76,8 @@
 	private boolean advance() throws IOException {
 		
 		while (hasMoreSpans && computeElementPosition()){			
-			logger.info("element: " + elements.start() + ","+ elements.end() +
+		        if (DEBUG)
+		 	    logger.info("element: " + elements.start() + ","+ elements.end() +
 					" ref:"+elements.getElementRef());
 			
 			if (checkElementRef() && checkNotElementRef()){			
@@ -82,7 +86,8 @@
 				this.matchEndPosition = elements.end();
 				this.matchPayload = elements.getPayload();
 				hasMoreSpans = attributeList.get(0).next();
-				logger.info("MATCH "+matchDocNumber);
+				if (DEBUG)
+				    logger.info("MATCH "+matchDocNumber);
 				
 				hasMoreSpans = elements.next();		
 				return true;
@@ -98,7 +103,8 @@
 		
 		for (AttributeSpans attribute: attributeList){			
 			if (elements.getElementRef() != attribute.getElementRef()){
-				logger.info("attribute ref doesn't match");
+			        if (DEBUG)
+				    logger.info("attribute ref doesn't match");
 				if (elements.getElementRef() < attribute.getElementRef())
 					hasMoreSpans = attribute.next();
 				else {
@@ -118,7 +124,8 @@
 		for (AttributeSpans notAttribute: notAttributeList){
 			if (elements.start() == notAttribute.start() &&
 					elements.getElementRef() == notAttribute.getElementRef()){
-				logger.info("not attribute ref exists");
+			        if (DEBUG)
+				    logger.info("not attribute ref exists");
 				hasMoreSpans = elements.next();	
 				return false;
 			}
@@ -136,13 +143,15 @@
 			if (elements.getElementRef() < 1){ // the element does not have an attribute
 				elements.isElementRef = true; // dummy setting enabling reading elementRef
 				hasMoreSpans = elements.next();
-				logger.info("skip");
+				if (DEBUG)
+				    logger.info("skip");
 				continue;
 			}
 			
 			if (checkAttributeListPosition() && 
 					checkNotAttributeListPosition()){
-				logger.info("element is found: "+ elements.start());
+			        if (DEBUG)
+				    logger.info("element is found: "+ elements.start());
 				return true;
 			}			
 		}		
@@ -159,7 +168,8 @@
 		
 		for (AttributeSpans a : notAttributeList){
 			// advance the doc# of not AttributeSpans
-			logger.info("a "+a.start());
+		        if (DEBUG)
+			    logger.info("a "+a.start());
 			while (!a.isFinish() &&	 a.doc() <= elements.doc()){
 				
 				if (a.doc() == elements.doc() &&
@@ -183,8 +193,8 @@
 		
 		for (AttributeSpans a : attributeList){
 			if(!ensureSamePosition(elements, a)) return false;
-				
-				logger.info("pos:" + elements.start());
+			        if (DEBUG)
+				    logger.info("pos:" + elements.start());
 				if (isFirst){ 
 					isFirst = false;
 					currentPosition = elements.start();
@@ -195,7 +205,8 @@
 				
 			}				 
 		}
-		logger.info("same pos: "+isSame+ ", pos "+elements.start());
+		if (DEBUG)
+		    logger.info("same pos: "+isSame+ ", pos "+elements.start());
 		return isSame;
 	}
 	
diff --git a/src/main/java/de/ids_mannheim/korap/query/spans/ElementSpans.java b/src/main/java/de/ids_mannheim/korap/query/spans/ElementSpans.java
index a9aa08b..5879946 100644
--- a/src/main/java/de/ids_mannheim/korap/query/spans/ElementSpans.java
+++ b/src/main/java/de/ids_mannheim/korap/query/spans/ElementSpans.java
@@ -33,7 +33,10 @@
 	
 	public boolean isElementRef = false; // A dummy flag
 	
-	protected Logger logger = LoggerFactory.getLogger(AttributeSpans.class);
+	protected Logger logger = LoggerFactory.getLogger(ElementSpans.class);
+
+        // This advices the java compiler to ignore all loggings
+        public static final boolean DEBUG = false;
 	
 	public ElementSpans(SpanElementQuery spanElementQuery,
 			AtomicReaderContext context, Bits acceptDocs,
@@ -70,7 +73,8 @@
 				return true;
 			}
 			else{
-				logger.info("Setting candidate list");
+			        if (DEBUG)
+				     logger.info("Setting candidate list");
 				setCandidateList();				
 				currentDoc = termSpans.doc();
 				currentPosition = termSpans.start();
diff --git a/src/main/java/de/ids_mannheim/korap/query/spans/MatchModifyClassSpans.java b/src/main/java/de/ids_mannheim/korap/query/spans/MatchModifyClassSpans.java
index 8fa1636..a45e1ee 100644
--- a/src/main/java/de/ids_mannheim/korap/query/spans/MatchModifyClassSpans.java
+++ b/src/main/java/de/ids_mannheim/korap/query/spans/MatchModifyClassSpans.java
@@ -19,46 +19,52 @@
 
 import java.nio.ByteBuffer;
 
+/**
+ * Modify matches to, for example, return only certain class or span ranges.
+ *
+ * @author diewald
+ */
+
 public class MatchModifyClassSpans extends Spans {
-    private List<byte[]> highlightedPayload;
+    private List<byte[]> wrappedPayload;
     private Collection<byte[]> payload;
     private final Spans spans;
     private byte number;
     private boolean divide;
     private ByteBuffer bb;
 
-    private SpanQuery highlight;
+    private SpanQuery wrapQuery;
     private final Logger log = LoggerFactory.getLogger(MatchModifyClassSpans.class);
+
     // This advices the java compiler to ignore all loggings
     public static final boolean DEBUG = false;
 
-
     private int start = -1, end;
     private int tempStart = 0, tempEnd = 0;
 
-
-    public MatchModifyClassSpans (SpanQuery highlight,
-		       AtomicReaderContext context,
-		       Bits acceptDocs,
-		       Map<Term,TermContext> termContexts,
-		       byte number,
-		       boolean divide) throws IOException {
-	spans = highlight.getSpans(context, acceptDocs, termContexts);
-	this.number = number;
-	this.divide = divide;
-	this.highlight = highlight;
-	this.highlightedPayload = new ArrayList<byte[]>(6);
-	bb = ByteBuffer.allocate(9);
+    public MatchModifyClassSpans (
+      SpanQuery wrapQuery,
+      AtomicReaderContext context,
+      Bits acceptDocs,
+      Map<Term,TermContext> termContexts,
+      byte number,
+      boolean divide) throws IOException {
+	this.spans     = wrapQuery.getSpans(context, acceptDocs, termContexts);
+	this.number    = number;
+	this.divide    = divide;
+	this.wrapQuery = wrapQuery;
+	this.bb        = ByteBuffer.allocate(9);
+	this.wrappedPayload = new ArrayList<byte[]>(6);
     };
 
     @Override
     public Collection<byte[]> getPayload() throws IOException {
-	return highlightedPayload;
+	return wrappedPayload;
     };
 
     @Override
     public boolean isPayloadAvailable() {
-	return highlightedPayload.isEmpty() == false;
+	return wrappedPayload.isEmpty() == false;
     };
 
     public int doc() { return spans.doc(); }
@@ -75,18 +81,24 @@
     // inherit javadocs
     @Override
     public boolean next() throws IOException {
+	/* TODO:
+	 * In case of a split() (instead of a submatch())
+	 * Is the cache empty?
+	 * Otherwise: Next from list
+	 */
+
 	if (DEBUG)
-	    log.trace("||> Forward next");
+	    log.trace("Forward next match");
 
-	highlightedPayload.clear();
+	// Next span
+	while (spans.next()) {
 
-	/*
-	  Bei divide:
-	  Ist der Speicher leer?
-	  Sonst der nächste Treffer vom Speicher!
-	*/
+	    if (DEBUG)
+		log.trace("Forward next inner span");
 
-	if (spans.next()) {
+	    // No classes stored
+	    wrappedPayload.clear();
+
 	    start = -1;
 	    if (spans.isPayloadAvailable()) {
 		end = 0;
@@ -95,10 +107,10 @@
 		for (byte[] payload : spans.getPayload()) {
 		    bb.clear();
 		    bb.put(payload);
-		    //		    bb = ByteBuffer.wrap(payload, 0, 10);
 		    bb.position(8);
 
 		    // Todo: Implement Divide
+		    // Found class payload of structure <i>start<i>end<b>class
 		    if (payload.length == 9 && bb.get() == this.number) {
 			bb.rewind();
 			tempStart = bb.getInt();
@@ -107,87 +119,61 @@
 			if (DEBUG)
 			    log.trace("Found matching class {}-{}", tempStart, tempEnd);
 
+			// Set start position 
 			if (start == -1)
 			    start = tempStart;
 			else if (tempStart < start)
 			    start = tempStart;
 
+			// Set end position
 			if (tempEnd > end)
 			    end = tempEnd;
 		    }
 
-		    // Doesn't mark an important payload - but should be kept
+		    // No class payload - but keep!
 		    else {
 			if (DEBUG)
 			    log.trace("Remember old payload {}", payload);
-			highlightedPayload.add(payload);
+			wrappedPayload.add(payload);
 		    };
 		};
-
-		/*
-
-		if (DEBUG)
-		    log.trace("All payload processed, now clean up");
-
-		// We have a payload found that is a class for modification!
-		if (start != -1) {
-		    int i = highlightedPayload.size() - 1;
-
-		    for (; i >= 0; i--) {
-			bb.clear();
-			bb.put(highlightedPayload.get(i),0,8);
-			bb.rewind();
-			if (bb.getInt() < start || bb.getInt() > end) {
-			    bb.rewind();
-			    if (DEBUG)
-				log.trace("Remove highlight {} with {}-{} for {}-{}", i, bb.getInt(), bb.getInt(), start, end);
-			    highlightedPayload.remove(i);
-			    continue;
-			};
-
-			if (DEBUG) {
-			    bb.rewind();
-			    log.trace("Highlight {} will stay with {}-{} for {}-{}", i, bb.getInt(), bb.getInt(), start, end);
-			};
-		    };
-		    // Todo: SPLIT
-		    // Vorsicht! Bei divide könnten Payloads mehrmals vergeben werden
-		    // müssen!
-		    
-		    };
-		*/
 	    };
 
+	    // Class not found
+	    if (start == -1)
+		continue;
 
-	    if (start == -1) {
-		start = spans.start();
-		end = spans.end();
-	    }
-	    else if (DEBUG) {
-		log.trace("Start to shrink to {} - {} class: {}",
-			  start, end, number);
-	    };
+	    if (DEBUG)
+		log.trace(
+		    "Start to focus on class {} from {} to {}",
+		    number,
+		    start,
+		    end
+		);
 
 	    return true;
 	};
+
+	// No more spans
 	return false;
     };
 
+
     // inherit javadocs
     @Override
-    public boolean skipTo(int target) throws IOException {
+    public boolean skipTo (int target) throws IOException {
 	return spans.skipTo(target);
     };
 
     @Override
-    public String toString() {
-	return getClass().getName() + "(" + this.highlight.toString() + ")@" +
+    public String toString () {
+	return getClass().getName() + "(" + this.wrapQuery.toString() + ")@" +
 	    (doc() + ":" + start() + "-" + end());
     };
 
 
     @Override
-    public long cost() {
+    public long cost () {
 	return spans.cost();
-    }
+    };
 };
diff --git a/src/main/java/de/ids_mannheim/korap/query/spans/NonPartialOverlappingSpans.java b/src/main/java/de/ids_mannheim/korap/query/spans/NonPartialOverlappingSpans.java
index e435d50..6a1c3d8 100644
--- a/src/main/java/de/ids_mannheim/korap/query/spans/NonPartialOverlappingSpans.java
+++ b/src/main/java/de/ids_mannheim/korap/query/spans/NonPartialOverlappingSpans.java
@@ -21,6 +21,9 @@
 public abstract class NonPartialOverlappingSpans extends SimpleSpans{
 	
 	private Logger log = LoggerFactory.getLogger(NonPartialOverlappingSpans.class);
+
+        // This advices the java compiler to ignore all loggings
+        public static final boolean DEBUG = false;
 	
 	public NonPartialOverlappingSpans(SimpleSpanQuery simpleSpanQuery,
 			AtomicReaderContext context, Bits acceptDocs,
@@ -52,9 +55,11 @@
 	  	while (hasMoreSpans && ensureSameDoc(firstSpans,secondSpans)){
 	  		int matchCase = findMatch();
 				if (matchCase == 0){
+				    if (DEBUG) {
 					log.trace("Match doc#: {}",matchDocNumber);
 					log.trace("Match positions: {}-{}", matchStartPosition, 
-							matchEndPosition);
+						  matchEndPosition);
+				    };
 					doCollectPayloads();
 					return true;
 				} 
@@ -78,15 +83,18 @@
   	/** Collecting available payloads from the current first and second spans */
   	private void doCollectPayloads() throws IOException {
   		if (collectPayloads){
+		    if (DEBUG)
   			log.trace("Collect payloads");
   		    if (firstSpans.isPayloadAvailable()) {
   		    	Collection<byte[]> payload = firstSpans.getPayload();
-  		    	log.trace("Found {} payloads in firstSpans", payload.size());
+			if (DEBUG)
+			    log.trace("Found {} payloads in firstSpans", payload.size());
   		    	matchPayload.addAll(payload);
   		    }
   		    if (secondSpans.isPayloadAvailable()) {
   		    	Collection<byte[]> payload = secondSpans.getPayload();
-  		    	log.trace("Found {} payloads in secondSpans", payload.size());
+			if (DEBUG)
+			    log.trace("Found {} payloads in secondSpans", payload.size());
   		    	matchPayload.addAll(payload);
   		    }
   		}
diff --git a/src/main/java/de/ids_mannheim/korap/query/spans/WithinSpans.java b/src/main/java/de/ids_mannheim/korap/query/spans/WithinSpans.java
index 94413ed..56724b4 100644
--- a/src/main/java/de/ids_mannheim/korap/query/spans/WithinSpans.java
+++ b/src/main/java/de/ids_mannheim/korap/query/spans/WithinSpans.java
@@ -32,10 +32,11 @@
 
 /*
   TODO: Use the flag in KorapQuery!
+  TODO: Support exclusivity
 */
 
 /**
- * Compare two spans and check, if the second one relates to the first one.
+ * Compare two spans and check how they relate positionally.
  *
  * @author Nils Diewald
  */
@@ -43,6 +44,7 @@
 
     // Logger
     private final Logger log = LoggerFactory.getLogger(WithinSpans.class);
+
     // This advices the java compiler to ignore all loggings
     public static final boolean DEBUG = false;
     
@@ -72,7 +74,7 @@
 
     /*
       Supported flags are currently:
-      ov  -> 0  | overlap:      A & B != empty)
+      ov  -> 0  | overlap:      A & B != empty
       rov -> 2  | real overlap: A & B != empty and
                                 ((A | B) != A or
                                  (A | B) != B)
@@ -84,6 +86,8 @@
       sw  -> 10 | startswith:   A | B = A and
                                 A.end = B.end
       m   -> 12 |               A = B
+
+      This may change in case the system switches to 16bit vector
      */
     public static final byte
 	OVERLAP      = (byte) 0,
@@ -96,11 +100,12 @@
 
     private byte flag;
 
+    // Contains the query
     private SpanWithinQuery query;
 
+    // Contains the spans
     private final Spans embeddedSpans, wrapSpans;
 
-
     private boolean tryMatch = true;
 
     private LinkedList<KorapLongSpan>
@@ -151,11 +156,11 @@
 
 	// Initialize spans
 	if (!this.init()) {
-	    this.more = false;
-	    this.inSameDoc = false;
-	    this.wrapDoc = DocIdSetIterator.NO_MORE_DOCS;
+	    this.more        = false;
+	    this.inSameDoc   = false;
+	    this.wrapDoc     = DocIdSetIterator.NO_MORE_DOCS;
 	    this.embeddedDoc = DocIdSetIterator.NO_MORE_DOCS;
-	    this.matchDoc = DocIdSetIterator.NO_MORE_DOCS;
+	    this.matchDoc    = DocIdSetIterator.NO_MORE_DOCS;
 	    return false;
 	};
 
@@ -682,11 +687,6 @@
 	    };
 	};
 
-	/*
-	if (DEBUG)
-	    log.trace("Match is {}", match);
-	*/
-
 	try {
 	    this.todo(currentCase);
 	}
diff --git a/src/main/java/de/ids_mannheim/korap/query/wrap/SpanSegmentQueryWrapper.java b/src/main/java/de/ids_mannheim/korap/query/wrap/SpanSegmentQueryWrapper.java
index 91dbcc4..e72c566 100644
--- a/src/main/java/de/ids_mannheim/korap/query/wrap/SpanSegmentQueryWrapper.java
+++ b/src/main/java/de/ids_mannheim/korap/query/wrap/SpanSegmentQueryWrapper.java
@@ -159,10 +159,8 @@
 	return this;
     };
 
-    // Identical to with
     public SpanSegmentQueryWrapper without (SpanSegmentQueryWrapper seg) {
 	if (!seg.isNull()) {
-	    // TODO!!!
 	    this.with(seg);
 	    this.isNull = false;
 	};
@@ -180,16 +178,10 @@
             );
 	}
 
+	// These are now identical but may be negative
 	else if (this.inclusive.size() == 0 && this.exclusive.size() >= 1) {
-
-	    // Not supported anymore
-	    // TODO: Raise error
-	    return (SpanQuery) new SpanNotQuery(
-		new SpanTermQuery(new Term(this.field, "T")),
-	        this._listToOrQuery(this.exclusive)
-            );
+	    return (SpanQuery) this._listToQuery(this.exclusive);
 	}
-
 	else if (this.inclusive.size() >= 1 && this.exclusive.size() == 0) {
 	    return (SpanQuery) this._listToQuery(this.inclusive);
 	};
@@ -197,7 +189,6 @@
 	return (SpanQuery) null;
     };
 
-
     private SpanQuery _listToQuery (ArrayList<SpanQuery> list) {
 	SpanQuery query = list.get(0);
 
@@ -208,7 +199,6 @@
 	return (SpanQuery) query;
     };
 
-
     private SpanQuery _listToOrQuery (ArrayList<SpanQuery> list) {
 	if (list.size() == 1) {
 	    return (SpanQuery) list.get(0);
@@ -240,5 +230,15 @@
 	};
 	return false;
     };
+
+    public void makeNegative () {
+	/*
+	  TODO: THIS IS A BIT MORE COMPLICATED!
+	  and and or groups have to be switched
+	 */
+
+	this.exclusive.addAll(this.inclusive);
+	this.inclusive.clear();
+    };
 };
 
diff --git a/src/main/java/de/ids_mannheim/korap/query/wrap/SpanWithinQueryWrapper.java b/src/main/java/de/ids_mannheim/korap/query/wrap/SpanWithinQueryWrapper.java
index 47face4..d67505c 100644
--- a/src/main/java/de/ids_mannheim/korap/query/wrap/SpanWithinQueryWrapper.java
+++ b/src/main/java/de/ids_mannheim/korap/query/wrap/SpanWithinQueryWrapper.java
@@ -11,10 +11,43 @@
 import org.apache.lucene.search.spans.SpanQuery;
 
 /*
-  Document: Optionality of operands will be ignored - while the optionality of the wrap is herited!
+  Todo:
+  - Exclusivity has to be supported
+  - In case the wrap is negative,
+    the query has to be interpreted as being exclusive!
+    - within(<s>,[base=term])   -> all <s> including [base=term]
+    - within(<s>,[base!=term])  -> all <s> not including [base=term]
+    - !within(<s>,[base=term]) -> all <s> not including [base=term]
+    - within(!<s>,[base!=term]) -> failure - embedding span has to be positive
+      -> Exception: It is an Overlap!
+    -> BUT! This becomes weird with classes, as
+       - within(<s>, {2:[base!=term]}) will match quite often!
+    -> so this is no valid solution!
 
-  Idea:
-  - Maybe inherit the optionality when it is in an element and rewrite the query to an alternation if the wrap is
+    Better - Exclusivity and Negation:
+    - within(<s>,[base!=term])  -> all <s>, hitting only [base!=term] tokens
+      -> is this technically doable? NO!
+    - !within(<s>,[base=term])  -> all <s>, not containing [base=term]
+    - within(!<s>,[base=term])  -> failure
+
+
+  - Optionality:
+    - At the moment:
+      - Optionality of operands will be ignored
+        while the optionality of the wrap is herited!
+    - within(<s>?, [base=term])      -> opt
+    - within(<s>, {2:[base=term]*})  -> (<s>|within(<s>, {2:[base=term]+}))
+    - within(<s>?, {2:[base=term]*}) -> (<s>|within(<s>, {2:[base=term]+})) and opt
+
+  - Speed improvement:
+    - Check for classes!
+    - within(<s>, [base=term]*) -> <s>
+    - within(<s>, {2:[base=term]*})  -> (<s>|within(<s>, {2:[base=term]+}))
+
+  - Special case overlaps(), overlapsStrictly():
+    - overlaps(<s>, <p>) == overlaps(<p>, <s>)
+    - overlaps(<s>?, <p>) -> optionality is always inherited!
+
 */
 
 
@@ -27,6 +60,9 @@
     public SpanWithinQueryWrapper (SpanQueryWrapperInterface element, SpanQueryWrapperInterface wrap) {
 	this.element = element;
 	this.wrap = wrap;
+
+	// TODO: if (wrap.isNegative())	    
+
 	this.flag = (byte) SpanWithinQuery.WITHIN;
 	if (!element.isNull() && !wrap.isNull())
 	    this.isNull = false;
@@ -37,6 +73,8 @@
 	this.wrap = wrap;
 	this.flag = flag;
 
+	// TODO: if (wrap.isNegative())
+
 	if (!element.isNull() && !wrap.isNull())
 	    this.isNull = false;
     };
@@ -45,6 +83,8 @@
 	if (this.isNull)
 	    return (SpanQuery) null;
 	
+	// TODO: if (wrap.isNegative())
+
 	return new SpanWithinQuery(this.element.toQuery(), this.wrap.toQuery(), this.flag);
     };
 
@@ -57,9 +97,8 @@
     };
 
     public boolean isNegative () {
-	if (this.element.isNegative() || this.wrap.isNegative()) {
+	if (this.element.isNegative())
 	    return true;
-	};
 	return false;
     };
 };
diff --git a/src/main/resources/log4j.properties b/src/main/resources/log4j.properties
index 3619d79..6de0cdd 100644
--- a/src/main/resources/log4j.properties
+++ b/src/main/resources/log4j.properties
@@ -4,6 +4,8 @@
 
 # Spans:
 #log4j.logger.de.ids_mannheim.korap.query.spans.ElementSpans = TRACE, stdout
+#log4j.logger.de.ids_mannheim.korap.query.spans.AttributeSpans = TRACE, stdout
+#log4j.logger.de.ids_mannheim.korap.query.spans.ElementAttributeSpans = TRACE, stdout
 #log4j.logger.de.ids_mannheim.korap.query.spans.KorapTermSpan = TRACE, stdout
 #log4j.logger.de.ids_mannheim.korap.query.spans.WithinSpans = TRACE, stdout
 #log4j.logger.de.ids_mannheim.korap.query.SpanNextQuery = TRACE, stdout
diff --git a/src/test/java/de/ids_mannheim/korap/index/TestMatchIndex.java b/src/test/java/de/ids_mannheim/korap/index/TestMatchIndex.java
index 10b80ec..0f3fe12 100644
--- a/src/test/java/de/ids_mannheim/korap/index/TestMatchIndex.java
+++ b/src/test/java/de/ids_mannheim/korap/index/TestMatchIndex.java
@@ -151,12 +151,12 @@
 
 	assertEquals("SnippetHTML (0) 2", "<span class=\"context-left\"><span class=\"more\"></span>a</span><span class=\"match\">b<em class=\"class-0 level-0\">a</em></span><span class=\"context-right\"><span class=\"more\"></span></span>", kr.match(0).snippetHTML());
 
-	// System.err.println(kr.toJSON());
-
 	sq = new SpanMatchModifyClassQuery(
-            new SpanNextQuery(
-	        new SpanClassQuery(new SpanTermQuery(new Term("base", "s:b")), (byte) 1),
-                new SpanClassQuery(new SpanTermQuery(new Term("base", "s:c")), (byte) 2)
+            new SpanClassQuery(
+                new SpanNextQuery(
+	            new SpanClassQuery(new SpanTermQuery(new Term("base", "s:b")), (byte) 1),
+                    new SpanClassQuery(new SpanTermQuery(new Term("base", "s:c")), (byte) 2)
+		), (byte) 3
             ), (byte) 3
 	);
 
@@ -173,6 +173,17 @@
 	assertEquals("Document count", 1, ki.numberOf("base", "documents"));
 	assertEquals("Token count", 10, ki.numberOf("base", "t"));
 
+	// Don't match the expected class!
+	sq = new SpanMatchModifyClassQuery(
+            new SpanNextQuery(
+	        new SpanClassQuery(new SpanTermQuery(new Term("base", "s:b")), (byte) 1),
+		new SpanClassQuery(new SpanTermQuery(new Term("base", "s:c")), (byte) 2)
+	    ), (byte) 3
+	);
+
+	kr = ki.search(sq, (short) 10);
+	
+	assertEquals("totalResults", 0, kr.totalResults());
 
 	sq = new SpanMatchModifyClassQuery(
             new SpanNextQuery(
diff --git a/src/test/java/de/ids_mannheim/korap/query/TestKorapQueryJSON.java b/src/test/java/de/ids_mannheim/korap/query/TestKorapQueryJSON.java
index 04cdb97..da0d5d7 100644
--- a/src/test/java/de/ids_mannheim/korap/query/TestKorapQueryJSON.java
+++ b/src/test/java/de/ids_mannheim/korap/query/TestKorapQueryJSON.java
@@ -18,12 +18,15 @@
 
     private String defaultFoundry = "mate/";
 
-    @Ignore
+    @Test
     public void queryJSONBsp1 () {
 	SpanQueryWrapperInterface sqwi = jsonQuery(getClass().getResource("/queries/bsp1.jsonld").getFile());
 
+	// There is a repetition in here
 	// ([base=foo]|[base=bar])[base=foobar]
-	assertEquals(sqwi.toQuery().toString(), "");
+	assertEquals(sqwi.toQuery().toString(),
+            "spanOr([tokens:base:foo, spanQuantifier(spanNext(tokens:base:foo, tokens:base:bar)[1:100])])");
+	assertTrue(sqwi.isOptional());
     };
 
     @Test
@@ -76,7 +79,7 @@
 	assertEquals(sqwi.toQuery().toString(), "tokens:"+defaultFoundry+"l:Katze");
     };
 
-    @Ignore
+    @Test
     public void queryJSONBsp7 () {
 	SpanQueryWrapperInterface sqwi = jsonQuery(getClass().getResource("/queries/bsp7.jsonld").getFile());
 
@@ -85,14 +88,6 @@
 	assertTrue(sqwi.isNegative());
     };
 
-    @Ignore
-    public void queryJSONBsp8 () {
-	SpanQueryWrapperInterface sqwi = jsonQuery(getClass().getResource("/queries/bsp8.json").getFile());
-
-	// [!base=Katze]
-	assertEquals(sqwi.toQuery().toString(), "");
-    };
-
     @Test
     public void queryJSONBsp9 () {
 	SpanQueryWrapperInterface sqwi = jsonQuery(getClass().getResource("/queries/bsp9.jsonld").getFile());
@@ -118,12 +113,18 @@
 	assertEquals(sqwi.toQuery().toString(), "spanNext(spanNext(tokens:"+defaultFoundry+"l:Katze, tokens:s:und), tokens:s:Hunde)");
     };
 
-    @Ignore
+    @Test
     public void queryJSONBsp11 () {
 	SpanQueryWrapperInterface sqwi = jsonQuery(getClass().getResource("/queries/bsp11.jsonld").getFile());
 
-	// [!(base=Katze&orth=Katzen)]
-	assertEquals(sqwi.toQuery().toString(), "");
+	// [base!=Katze | orth!=Katzen]
+	/*
+	  Imagine a([^b]|[^c])d
+	  Matches abd and acd
+	  Interpretation would be not(spanAnd(...))
+	*/
+	assertEquals(sqwi.toQuery().toString(), "spanOr([tokens:mate/l:Katze, tokens:s:Katzen])");
+	assertTrue(sqwi.isNegative());
     };
 
     @Test
@@ -134,12 +135,11 @@
 	assertEquals(sqwi.toQuery().toString(), "spanContain(<tokens:np />, tokens:"+defaultFoundry+"l:Mann)");
     };
 
-    @Ignore
+    @Test
     public void queryJSONBsp13 () {
 	SpanQueryWrapperInterface sqwi = jsonQuery(getClass().getResource("/queries/bsp13.jsonld").getFile());
 
-	// startswith(<np>,[!pos=Det])
-	assertEquals(sqwi.toQuery().toString(), "");
+	assertEquals(sqwi.toQuery().toString(), "spanStartsWith(<tokens:np />, tokens:mate/p:Det)");
     };
 
     @Test
diff --git a/src/test/resources/queries/bsp1.jsonld b/src/test/resources/queries/bsp1.jsonld
index 5361a5c..3cc2171 100644
--- a/src/test/resources/queries/bsp1.jsonld
+++ b/src/test/resources/queries/bsp1.jsonld
@@ -1,46 +1,46 @@
 {
-    "@context" : "http://ids-mannheim.de/ns/KorAP/json-ld/v0.1/context.jsonld",
-    "query": {
+  "@context" : "http://ids-mannheim.de/ns/KorAP/json-ld/v0.1/context.jsonld",
+  "query": {
+    "@type": "korap:group", 
+    "operation": "operation:or",
+    "operands": [
+      {
+	"@type": "korap:token", 
+	"wrap": {
+	  "@type": "korap:term", 
+	  "layer": "base",
+	  "key": "foo"
+	}
+      }, 
+      {
 	"@type": "korap:group", 
-	"operation": "operation:or",
+	"min" : 0,
+	"operation": "operation:repetition",
 	"operands": [
-	    {
+	  {
+	    "@type": "korap:group", 
+	    "operation" : "operation:sequence",
+	    "operands": [
+	      {
 		"@type": "korap:token", 
 		"wrap": {
-		    "@type": "korap:term", 
-		    "layer": "base",
-		    "key": "foo"
+		  "@type": "korap:term", 
+		  "key": "foo", 
+		  "layer" : "base"
 		}
-	    }, 
-	    {
-		"@type": "korap:group", 
-		"min" : 0,
-		"operation": "operation:repetition",
-		"operands": [
-		    {
-			"@type": "korap:group", 
-			"operation" : "operation:sequence",
-			"operands": [
-			    {
-				"@type": "korap:token", 
-				"wrap": {
-				    "@type": "korap:term", 
-				    "key": "foo", 
-				    "layer" : "base"
-				}
-			    }, 
-			    {
-				"@type": "korap:token", 
-				"wrap": {
-				    "@type": "korap:term",
-				    "layer": "base",
-				    "key" : "bar"
-				}
-			    }
-			]
-		    }
-		]
-	    }
+	      },
+	      {
+		"@type": "korap:token", 
+		"wrap": {
+		  "@type": "korap:term",
+		  "layer": "base",
+		  "key" : "bar"
+		}
+	      }
+	    ]
+	  }
 	]
-    }
+      }
+    ]
+  }
 }
diff --git a/src/test/resources/queries/bsp13.jsonld b/src/test/resources/queries/bsp13.jsonld
index f67adef..bb177ee 100644
--- a/src/test/resources/queries/bsp13.jsonld
+++ b/src/test/resources/queries/bsp13.jsonld
@@ -115,7 +115,7 @@
           "@type": "korap:term", 
           "layer": "pos",
           "key" : "Det", 
-	      "match" : "match:ne"
+          "match" : "match:ne"
         }
       }
     ]