commit a2965dd8bcf8e25b7fae15fc89074ec751fd85b4
author Marc Kupietz <kupietz@ids-mannheim.de> Sat Apr 12 17:22:34 2025 +0200
committer Marc Kupietz <kupietz@ids-mannheim.de> Sun Apr 13 12:07:51 2025 +0200
tree c13c8a42d8f34f157a7966fa03164c08dc2f756f
parent c015f7466dca7cd465594dcee8867265fc624b27

GH-CI: Fix finding libR.dylib on macos

Change-Id: I3320ddfbca364eb71e824ffd8f2010794c58663c

.github/workflows/pythonpackage.yml

diff --git a/.github/workflows/pythonpackage.yml b/.github/workflows/pythonpackage.yml
index 19d2e91..86791d8 100644
--- a/.github/workflows/pythonpackage.yml
+++ b/.github/workflows/pythonpackage.yml
@@ -25,13 +25,18 @@
       with:
         r-version: ${{ matrix.r-version }}
         use-public-rspm: true
-        cache-version: 2
-    - name: Set env commands (POSIX)
-      if: "!startsWith(matrix.os, 'windows')"
+    - name: Set env commands (Linux)
+      if: runner.os == 'Linux'
       run: |
           echo "VENV_ACTIVATE=source pyenv_base/bin/activate" >> $GITHUB_ENV
-          echo "LD_LIBRARY_PATH=$(dirname $(find / -name libR.so)):${LD_LIBRARY_PATH}" >> $GITHUB_ENV
+          echo "LD_LIBRARY_PATH=$(dirname $(find / -name libR.so  2> /dev/null)):${LD_LIBRARY_PATH}" >> $GITHUB_ENV
           echo "R_LIBRARY=export LD_LIBRARY_PATH=$(python -m rpy2.situation LD_LIBRARY_PATH):${LD_LIBRARY_PATH}" >> $GITHUB_ENV
+    - name: Set env commands (MacOS)
+      if: "startsWith(matrix.os, 'macos')"
+      run: |
+          echo "VENV_ACTIVATE=source pyenv_base/bin/activate" >> $GITHUB_ENV
+          echo "R_LIBRARY=$(find /Library -name libR.dylib 2> /dev/null | head -1)" >> $GITHUB_ENV
+          echo "LD_LIBRARY_PATH=$(dirname $(find /Library -name libR.dylib 2> /dev/null | head -1)):${LD_LIBRARY_PATH}" >> $GITHUB_ENV
     - name: Set virtualenv activation command (Windows)
       if: startsWith(matrix.os, 'windows')
       shell: bash
@@ -96,7 +101,8 @@
     - name: Test with pytest on POSIX
       if: runner.os != 'Windows'
       run: |
-        export LD_LIBRARY_PATH=$(python -m rpy2.situation LD_LIBRARY_PATH):${LD_LIBRARY_PATH}
+        export LD_LIBRARY_PATH=$(dirname $R_LIBRARY):${LD_LIBRARY_PATH}
+        echo $LD_LIBRARY_PATH
         python -m ensurepip --upgrade
         python -m pip install pytest
         pytest KorAPClient/tests  --junitxml=junit/test-results-${{ matrix.python-version }}.xml