| #' Convert a LaTeX table to an image and place it in a rmarkdown document |
| #' |
| #' @description This is a LaTeX-only function. This function will render the |
| #' raw LaTeX code (could be codes generated by other table packages like |
| #' `xtable`) to generate a table, convert it to an image and put it back to a |
| #' rmarkdown environment. It is a "better than nothing" solution to print high |
| #' quality tables in rmarkdown Word document. By using this, you need to take |
| #' the responsibility of explaining to your collaborators why they can't make |
| #' edits to the tables in Word. |
| #' |
| #' Also, if a filename is provided, user has the option to "save" the table to |
| #' an image file like `ggplot2::ggsave()`. |
| #' |
| #' Note that, if you are using this function on a Windows computer, you need |
| #' to install Ghostscript before you can use this feature. It is essential for |
| #' magick to read PDFs on Windows. Website for Ghostscript: https://ghostscript.com/ |
| #' |
| #' The idea of this function was coming from [this StackOverflow question](https://stackoverflow.com/questions/44711313/save-rmarkdowns-report-tables-and-figures-to-file). |
| #' The approach was learned and adopted from the [texpreview](https://github.com/metrumresearchgroup/texPreview) |
| #' package, which allows you to preview the results of TeX code in the Viewer panel. |
| #' |
| #' @param kable_input Raw LaTeX code to generate a table. It doesn't have to |
| #' came from `kable` or `kableExtra`. |
| #' @param filename Character String. If specified, the image will be saved under |
| #' the specified (path &) name. You don't need to put file format like ".png" |
| #' here. |
| #' @param file_format Character String to specify image format, such as `png`, |
| #' `jpeg`, `gif`, `tiff`, etc. Default is `png`. |
| #' @param latex_header_includes A character vector of extra LaTeX header stuff. |
| #' Each element is a row. You can have things like |
| #' `c("\\\\usepackage{threeparttable}", "\\\\usepackage{icons}")` |
| #' @param keep_pdf A T/F option to control if the mid-way standalone pdf should |
| #' be kept. Default is `FALSE`. |
| #' @param density Resolution to read the PDF file. Default value is 300, which |
| #' should be sufficient in most cases. |
| #' @param keep_tex A T/F option to control if the latex file that is initially created |
| #' should be kept. Default is `FALSE`. |
| #' |
| #' @export |
| kable_as_image <- function(kable_input, filename = NULL, |
| file_format = "png", |
| latex_header_includes = NULL, |
| keep_pdf = FALSE, |
| density = 300, |
| keep_tex = FALSE) { |
| if (!requireNamespace("magick", quietly = TRUE)) { |
| stop('kable_as_image requires the magick package, which is not available ', |
| 'on all platforms. Please get it installed ', |
| 'via install.packages("magick"). If you are running on Windows, you ', |
| 'also need to install Ghostscript. Please download it here:', |
| 'https://ghostscript.com/') |
| } else { |
| temp_tex <- c( |
| "\\documentclass[border=1mm, preview]{standalone}", |
| "\\usepackage[active,tightpage]{preview}", |
| "\\usepackage{varwidth}", |
| "\\usepackage{amssymb, amsmath}", |
| "\\usepackage{ifxetex,ifluatex}", |
| "\\usepackage{fixltx2e}", |
| "\\usepackage{polyglossia}", |
| "\\setmainlanguage{$mainlang$}", |
| latex_pkg_list(), |
| "\\usepackage{graphicx}", |
| "\\usepackage{mathspec}", |
| "\\usepackage{xltxtra,xunicode}", |
| latex_header_includes, |
| "\\begin{document}", |
| solve_enc(kable_input), |
| "\\end{document}" |
| ) |
| temp_tex <- paste(temp_tex, collapse = "\n") |
| temp_file <- paste0("table_", format(Sys.time(), "%Y-%m-%d_%H%M%S")) |
| writeLines(temp_tex, paste0(temp_file, ".tex"), useBytes = T) |
| system(paste0("xelatex -interaction=batchmode ", temp_file, ".tex")) |
| temp_file_delete <- paste0(temp_file, c(".tex", ".aux", ".log")) |
| if(!keep_tex) { |
| unlink(temp_file_delete) |
| } |
| |
| table_img_pdf <- try(magick::image_read(paste0(temp_file, ".pdf"), |
| density = density), |
| silent = T) |
| if (class(table_img_pdf) == "try-error") { |
| stop("Ghostscript is required to read PDF on windows. ", |
| "Please download it here: https://ghostscript.com/") |
| } |
| if (!keep_pdf) { |
| unlink(paste0(temp_file, ".pdf")) |
| } |
| table_img <- magick::image_convert(table_img_pdf, file_format) |
| if (!is.null(filename)) { |
| temp_img <- paste0(filename, ".", file_format) |
| } else { |
| temp_img <- tempfile(fileext = paste0(".", file_format)) |
| } |
| magick::image_write(table_img, temp_img) |
| |
| include_graphics(temp_img) |
| } |
| } |