.github/workflows/check-linux.yaml

on: [push, pull_request]

name: check-linux

jobs:
  R-CMD-check:
    runs-on: ${{ matrix.config.os }}

    name: ${{ matrix.config.os }} (${{ matrix.config.r }})

    strategy:
      fail-fast: false
      matrix:
        config:
        - { os: ubuntu-18.04, r: 'release', cran: "https://demo.rstudiopm.com/all/__linux__/bionic/latest", args: "--no-manual" }

    env:
      R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
      CRAN: ${{ matrix.config.cran }}
      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

    steps:
      - uses: actions/checkout@v1

      - uses: r-lib/actions/setup-r@master
        with:
          r-version: ${{ matrix.config.r }}

      - uses: r-lib/actions/setup-pandoc@master

      - uses: r-lib/actions/setup-tinytex@master
        if: contains(matrix.config.args, 'no-manual') == false

      - name: Install system dependencies
        if: runner.os == 'Linux'
        run: |
          sudo apt-get update -y
          sudo apt-get install -y libglpk-dev libjq-dev libv8-dev libprotobuf-dev protobuf-compiler libudunits2-dev libgdal-dev

      - name: Cache R packages
        uses: actions/cache@v1
        with:
          path: ${{ env.R_LIBS_USER }}
          key: ${{ runner.os }}-r-${{ matrix.config.r }}-${{ hashFiles('DESCRIPTION') }}

      - name: Install dependencies
        run: Rscript -e "install.packages('remotes')" -e "remotes::install_deps(dependencies = TRUE)" -e "remotes::install_cran('rcmdcheck')" -e "install.packages('igraph')" -e "install.packages('covr')"

      - name: Check
        run: Rscript -e "rcmdcheck::rcmdcheck(args = c('${{ matrix.config.args }}', '--run-donttest'), error_on = 'warning', check_dir = 'check')"

      - name: Upload check results
        if: failure()
        uses: actions/upload-artifact@master
        with:
          name: ${{ runner.os }}-r${{ matrix.config.r }}-results
          path: check

      - name: Test coverage
        run: covr::codecov()
        shell: Rscript {0}